Files
q3DMASC/q3DMASCClassifier.cpp
T
2018-10-26 10:46:35 +02:00

347 lines
9.9 KiB
C++

//##########################################################################
//# #
//# CLOUDCOMPARE PLUGIN: q3DMASC #
//# #
//# This program is free software; you can redistribute it and/or modify #
//# it under the terms of the GNU General Public License as published by #
//# the Free Software Foundation; version 2 or later of the License. #
//# #
//# This program is distributed in the hope that it will be useful, #
//# but WITHOUT ANY WARRANTY; without even the implied warranty of #
//# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the #
//# GNU General Public License for more details. #
//# #
//# COPYRIGHT: Dimitri Lague / CNRS / UEB #
//# #
//##########################################################################
#include "q3DMASCClassifier.h"
//Local
#include "ScalarFieldWrappers.h"
//qCC_db
#include <ccPointCloud.h>
#include <ccLog.h>
//qCC_io
#include <LASFields.h>
//Qt
#include <QCoreApplication>
#include <QProgressDialog>
using namespace masc;
Classifier::Classifier()
{
}
bool Classifier::isValid() const
{
return (m_rtrees && m_rtrees->isTrained());
}
bool Classifier::train(const TrainParameters& params, const Feature::Set& features, QString& errorMessage, QWidget* parentWidget/*=nullptr*/)
{
if (features.empty())
{
errorMessage = QObject::tr("Training method called without any feature?!");
return false;
}
if (!features.front() || !features.front()->cloud)
{
errorMessage = QObject::tr("Invalid feature (no associated point cloud");
return false;
}
ccPointCloud* cloud = features.front()->cloud;
//look for the classification field
int classifSFIdx = cloud->getScalarFieldIndexByName(LAS_FIELD_NAMES[LAS_CLASSIFICATION]); //LAS_FIELD_NAMES[LAS_CLASSIFICATION] = "Classification"
if (!classifSFIdx)
{
errorMessage = QObject::tr("Missing 'Classification' field on input cloud");
return false;
}
CCLib::ScalarField* classifSF = cloud->getScalarField(classifSFIdx);
if (!classifSF || classifSF->size() < cloud->size())
{
assert(false);
errorMessage = QObject::tr("Invalid 'Classification' field on input cloud");
return false;
}
if (params.testDataRatio < 0 || params.testDataRatio > 0.99f)
{
errorMessage = QObject::tr("Invalid parameter (test data ratio)");
return false;
}
//std::vector<Feature::Shared> features;
//features.push_back(Feature::Shared(new PointFeature(cloud, PointFeature::Z, Feature::DimZ, "Z")));
//features.push_back(Feature::Shared(new PointFeature(cloud, PointFeature::Intensity, Feature::ScalarField, "Intensity")));
int totalSampleCount = static_cast<int>(cloud->size());
int testSampleCount = static_cast<int>(floor(totalSampleCount * params.testDataRatio));
int sampleCount = totalSampleCount - testSampleCount;
int attributesPerSample = static_cast<int>(features.size());
ccLog::Print(QString("[3DMASC] Training data: %1 samples with %2 feature(s) / %3 test samples").arg(sampleCount).arg(attributesPerSample).arg(testSampleCount));
//randomly choose the sample indexes
std::vector<bool> isSample;
if (testSampleCount > 0)
{
try
{
isSample.resize(totalSampleCount, true);
}
catch (const std::bad_alloc&)
{
errorMessage = QObject::tr("Not enough memory");
return false;
}
int randomCount = 0;
int randIndex = 0;
while (randomCount < testSampleCount)
{
randIndex = ((randIndex + std::rand()) % totalSampleCount);
if (isSample[randIndex])
{
isSample[randIndex] = false;
++randomCount;
}
}
}
//NUMBER_OF_TRAINING_SAMPLES = number of points
//ATTRIBUTES_PER_SAMPLE = number of scalar fields
cv::Mat training_data, train_labels;
cv::Mat test_data, test_labels;
try
{
training_data.create(sampleCount, attributesPerSample, CV_32FC1);
train_labels.create(sampleCount, 1, CV_32FC1);
test_data.create(testSampleCount, attributesPerSample, CV_32FC1);
test_labels.create(testSampleCount, 1, CV_32FC1);
}
catch (const cv::Exception& cvex)
{
errorMessage = cvex.msg.c_str();
return false;
}
//fill the classification labels vector
{
unsigned sampleIndex = 0;
unsigned testSampleIndex = 0;
for (unsigned i = 0; i < cloud->size(); ++i)
{
ScalarType pointClass = classifSF->getValue(i);
int iClass = static_cast<int>(pointClass);
if (iClass < 0 || iClass > 255)
{
errorMessage = QObject::tr("Classification values out of range (0-255)");
return false;
}
if (isSample[i])
{
train_labels.at<float>(sampleIndex++) = static_cast<unsigned char>(iClass);
}
else
{
test_labels.at<float>(testSampleIndex++) = static_cast<unsigned char>(iClass);
}
}
assert(sampleIndex + testSampleIndex == totalSampleCount);
}
//fill the training data matrix
for (int fIndex = 0; fIndex < attributesPerSample; ++fIndex)
{
QScopedPointer<IScalarFieldWrapper> source(nullptr);
const Feature::Shared &f = features[fIndex];
switch (f->source)
{
case Feature::ScalarField:
{
int sfIdx = cloud->getScalarFieldIndexByName(qPrintable(f->sourceName));
if (sfIdx >= 0)
{
source.reset(new ScalarFieldWrapper(cloud->getScalarField(sfIdx)));
}
else
{
errorMessage = QObject::tr("Internal error: unknwon scalar field '%1'").arg(f->sourceName);
return false;
}
}
break;
case Feature::DimX:
source.reset(new DimScalarFieldWrapper(cloud, DimScalarFieldWrapper::DimX));
break;
case Feature::DimY:
source.reset(new DimScalarFieldWrapper(cloud, DimScalarFieldWrapper::DimY));
break;
case Feature::DimZ:
source.reset(new DimScalarFieldWrapper(cloud, DimScalarFieldWrapper::DimZ));
break;
case Feature::Red:
source.reset(new ColorScalarFieldWrapper(cloud, ColorScalarFieldWrapper::Red));
break;
case Feature::Green:
source.reset(new ColorScalarFieldWrapper(cloud, ColorScalarFieldWrapper::Green));
break;
case Feature::Blue:
source.reset(new ColorScalarFieldWrapper(cloud, ColorScalarFieldWrapper::Blue));
break;
}
if (!source || !source->isValid())
{
assert(false);
errorMessage = QObject::tr("Internal error: invalid source '%1'").arg(f->sourceName);
return false;
}
unsigned sampleIndex = 0;
unsigned testSampleIndex = 0;
for (unsigned i = 0; i < cloud->size(); ++i)
{
double value = source->pointValue(i);
if (isSample[i])
{
assert(sampleIndex < sampleCount);
training_data.at<float>(sampleIndex++, fIndex) = static_cast<float>(value);
}
else
{
assert(testSampleIndex< testSampleCount);
test_data.at<float>(testSampleIndex++, fIndex) = static_cast<float>(value);
}
}
assert(sampleIndex + testSampleIndex == totalSampleCount);
}
QProgressDialog pDlg(parentWidget);
pDlg.setRange(0, 0); //infinite loop
pDlg.setLabelText("Training classifier");
pDlg.show();
QCoreApplication::processEvents();
m_rtrees = cv::ml::RTrees::create();
m_rtrees->setMaxDepth(params.rt.maxDepth);
m_rtrees->setMinSampleCount(params.rt.minSampleCount);
m_rtrees->setCalculateVarImportance(params.rt.calcVarImportance);
m_rtrees->setActiveVarCount(params.rt.activeVarCount);
cv::TermCriteria terminationCriteria(cv::TermCriteria::MAX_ITER, params.rt.maxTreeCount, std::numeric_limits<double>::epsilon());
m_rtrees->setTermCriteria(terminationCriteria);
//rtrees->setRegressionAccuracy(0);
//rtrees->setUseSurrogates(false);
//rtrees->setMaxCategories(params.maxCategories); //not important?
//rtrees->setPriors(cv::Mat());
try
{
m_rtrees->train(training_data, cv::ml::ROW_SAMPLE, train_labels);
}
catch (const cv::Exception& cvex)
{
m_rtrees.release();
errorMessage = cvex.msg.c_str();
return false;
}
catch (const std::exception& stdex)
{
errorMessage = stdex.what();
return false;
}
catch (...)
{
errorMessage = QObject::tr("Unknown error");
return false;
}
pDlg.hide();
QCoreApplication::processEvents();
if (!m_rtrees->isTrained())
{
errorMessage = QObject::tr("Training failed for an unknown reason...");
m_rtrees.release();
return false;
}
//estimate the efficiency of the classiier
{
int goodGuessCount = 0;
for (int j = 0; j < testSampleCount; ++j)
{
if (m_rtrees->predict(test_data.row(j)) == test_labels.at<float>(j))
{
++goodGuessCount;
}
}
float acc = static_cast<float>(goodGuessCount) / testSampleCount;
ccLog::Print(QString("Correct = %1 / %2 --> Accuracy = %3").arg(goodGuessCount).arg(testSampleCount).arg(acc));
}
//QString outputFilename = QCoreApplication::applicationDirPath() + "/classifier.yaml";
return true;
}
bool Classifier::toFile(QString filename, QWidget* parentWidget/*=nullptr*/) const
{
if (!m_rtrees)
{
ccLog::Warning(QObject::tr("Classifier hasn't been trained, can't save it"));
return false;
}
//save the classifier
QProgressDialog pDlg(parentWidget);
pDlg.setRange(0, 0); //infinite loop
pDlg.setLabelText(QObject::tr("Saving classifier"));
pDlg.show();
QCoreApplication::processEvents();
m_rtrees->save(filename.toStdString());
pDlg.close();
QCoreApplication::processEvents();
ccLog::Print("Classifier file saved to: " + filename);
return true;
}
bool Classifier::fromFile(QString filename, QWidget* parentWidget/*=nullptr*/)
{
//load the classifier
QProgressDialog pDlg(parentWidget);
pDlg.setRange(0, 0); //infinite loop
pDlg.setLabelText(QObject::tr("Loading classifier"));
pDlg.show();
QCoreApplication::processEvents();
m_rtrees = cv::ml::RTrees::load(filename.toStdString());
pDlg.close();
QCoreApplication::processEvents();
if (!m_rtrees->isTrained())
{
ccLog::Warning(QObject::tr("Loaded classifier doesn't seem to be trained"));
}
return true;
}